| Pl. | Mannschaft | Games | Goal difference | Pts |
|---|---|---|---|---|
| 1 | FC Bayern II | 95 | 37 | 159 |
| 2 | Wolfsburg II | 95 | 10 | 147 |
| 3 | Gütersloh | 96 | 17 | 140 |
| 4 | Meppen | 68 | 71 | 133 |
| 5 | Hoffenheim II | 95 | -6 | 129 |
| 6 | RB Leipzig | 53 | 83 | 117 |
| 7 | Andernach | 69 | 33 | 108 |
| 8 | Nürnberg | 52 | 27 | 93 |
| 9 | Jena | 54 | 13 | 84 |
| 10 | FC Ingolstadt | 69 | -23 | 80 |
| 11 | Potsdam II | 72 | -34 | 78 |
| 12 | Frankfurt II | 48 | 15 | 76 |
| 13 | FSV FfM II | 55 | -19 | 62 |
| 14 | Duisburg | 26 | 33 | 60 |
| 15 | Saarbrücken | 43 | -2 | 52 |
| 16 | FC Köln | 27 | 22 | 50 |
| 17 | Cloppenburg | 42 | -23 | 46 |
| 18 | Bremen | 16 | 32 | 40 |
| 19 | SC Sand | 26 | -1 | 35 |
| 20 | Frankfurt II | 29 | -10 | 35 |
| 21 | Hessen Wetzlar | 26 | -16 | 30 |
| 22 | Weinberg | 26 | -25 | 30 |
| 23 | Freiburg II | 26 | -4 | 28 |
| 24 | M'gladbach | 18 | -5 | 27 |
| 25 | SV 07 Elversbe | 26 | -32 | 22 |
| 26 | SV Henstedt-U. | 26 | -38 | 19 |
| 27 | Bielefeld | 18 | -8 | 18 |
| 28 | 1. FC Köln II | 26 | -40 | 18 |
| 29 | Bocholt | 27 | -43 | 17 |
| 30 | SGS Essen II | 26 | -64 | 6 |
| 31 | Niederkirche | 1 | -2 | 0 |
| 32 | K. Würzburg | 1 | -2 | 0 |
| 33 | SV Berghofen | 1 | -5 | 0 |