| Pl. | Mannschaft | Games | Goal difference | Pts |
|---|---|---|---|---|
| 1 | Kashima | 271 | 122 | 461 |
| 2 | Kawasaki | 269 | 122 | 454 |
| 3 | Hiroshima | 270 | 109 | 442 |
| 4 | Urawa Reds | 271 | 90 | 431 |
| 5 | Yokohama | 271 | 71 | 428 |
| 6 | Gamba Osaka | 237 | 96 | 384 |
| 7 | Kashiwa Reysol | 237 | 44 | 375 |
| 8 | Nagoya | 233 | 34 | 370 |
| 9 | Cerezo Osaka | 236 | 58 | 343 |
| 10 | Vegalta Sendai | 266 | -20 | 343 |
| 11 | Shimizu | 270 | -60 | 342 |
| 12 | FC Tokyo | 237 | 40 | 339 |
| 13 | Vissel Kobe | 236 | -39 | 292 |
| 14 | Sagan Tosu | 203 | -12 | 287 |
| 15 | A. Niigata | 237 | -61 | 286 |
| 16 | Jubilo Iwata | 203 | -4 | 259 |
| 17 | Omiya Ardija | 203 | -76 | 230 |
| 18 | Ventforet Kofu | 170 | -69 | 180 |
| 19 | Shonan | 134 | -82 | 130 |
| 20 | C. Sapporo | 102 | -71 | 112 |
| 21 | Montedio Yamag | 100 | -81 | 86 |
| 22 | V. Nagasaki | 34 | -20 | 30 |
| 23 | Matsumoto Yama | 33 | -24 | 27 |
| 24 | Avispa Fukuo | 34 | -41 | 22 |
| 25 | Kyoto Sanga FC | 33 | -32 | 16 |
| 26 | Oita Trinita | 34 | -36 | 14 |
| 27 | Tokushima Vort | 34 | -58 | 14 |