| Pl. | Mannschaft | Games | Goal difference | Pts |
|---|---|---|---|---|
| 1 | Kawasaki | 337 | 202 | 597 |
| 2 | Kashima | 339 | 157 | 583 |
| 3 | Hiroshima | 338 | 134 | 545 |
| 4 | Yokohama | 339 | 111 | 545 |
| 5 | Urawa Reds | 339 | 61 | 514 |
| 6 | Gamba Osaka | 305 | 106 | 496 |
| 7 | Nagoya | 301 | 46 | 470 |
| 8 | Cerezo Osaka | 304 | 81 | 462 |
| 9 | FC Tokyo | 305 | 62 | 460 |
| 10 | Kashiwa Reysol | 271 | 58 | 427 |
| 11 | Vegalta Sendai | 334 | -52 | 412 |
| 12 | Shimizu | 338 | -106 | 409 |
| 13 | Vissel Kobe | 304 | -46 | 375 |
| 14 | Sagan Tosu | 271 | -39 | 359 |
| 15 | Jubilo Iwata | 237 | -26 | 290 |
| 16 | A. Niigata | 237 | -61 | 286 |
| 17 | Omiya Ardija | 204 | -78 | 230 |
| 18 | C. Sapporo | 170 | -77 | 197 |
| 19 | Shonan | 202 | -124 | 193 |
| 20 | Ventforet Kofu | 171 | -69 | 181 |
| 21 | Oita Trinita | 102 | -45 | 104 |
| 22 | Montedio Yamag | 102 | -80 | 89 |
| 23 | Matsumoto Yama | 67 | -43 | 58 |
| 24 | Yokohama FC | 34 | -22 | 33 |
| 25 | V. Nagasaki | 34 | -20 | 30 |
| 26 | Avispa Fukuo | 34 | -41 | 22 |
| 27 | Tokushima Vort | 36 | -57 | 18 |
| 28 | Kyoto Sanga FC | 33 | -32 | 16 |