| 1 | Zenit St. PetersburgSt. PetersburgPremier Liga | 26 | 780 | 440 | 209 | 131 | 1440:703 | 737 | 1529 |
| 2 | ZSKA MoskauZSKA MoskauPremier Liga | 26 | 779 | 427 | 185 | 167 | 1302:697 | 605 | 1466 |
| 3 | Lokomotive MoskauLok. MoskauPremier Liga | 26 | 787 | 385 | 224 | 178 | 1170:785 | 385 | 1379 |
| 4 | Spartak MoskauSpartak MoskauPremier Liga | 26 | 781 | 388 | 184 | 209 | 1260:910 | 350 | 1348 |
| 5 | Dynamo MoskauDyn. MoskauPremier Liga | 25 | 754 | 299 | 207 | 248 | 1032:920 | 112 | 1104 |
| 6 | Rubin KazanRubin KazanPremier Liga | 22 | 675 | 272 | 194 | 209 | 841:717 | 124 | 1010 |
| 7 | FK RostowFK RostowPremier Liga | 23 | 696 | 226 | 194 | 276 | 780:897 | -117 | 872 |
| 8 | FK KrasnodarKrasnodarPremier Liga | 15 | 455 | 223 | 120 | 112 | 750:482 | 268 | 789 |
| 9 | Krylia Sowjetow SamaraSamaraPremier Liga | 23 | 639 | 197 | 165 | 277 | 707:866 | -159 | 756 |
| 10 | FK Terek GrosnyTerek GrosnyPremier Liga | 19 | 576 | 188 | 144 | 244 | 613:753 | -140 | 708 |
| 11 | Amkar PermAmkar Perm- | 14 | 438 | 124 | 140 | 174 | 391:513 | -122 | 512 |
| 12 | Saturn RamenskoyeSaturn Ramensk- | 11 | 334 | 114 | 115 | 105 | 373:341 | 32 | 457 |
| 13 | Anzhi MakhachkalaMakhachkalaPremier Liga | 13 | 388 | 107 | 112 | 169 | 383:505 | -122 | 433 |
| 14 | Ural JekaterinburgJekaterinburg- | 11 | 335 | 98 | 93 | 144 | 345:474 | -129 | 387 |
| 15 | Torpedo MoskauTorp. MoskauPremier Liga | 10 | 240 | 92 | 68 | 80 | 323:308 | 15 | 344 |
| 16 | Tom TomskTomsk- | 10 | 289 | 78 | 77 | 134 | 261:397 | -136 | 311 |
| 17 | FK MoskauFK Moskau- | 9 | 208 | 78 | 68 | 62 | 250:230 | 20 | 302 |
| 18 | Kuban KrasnodarKuban- | 8 | 255 | 71 | 88 | 96 | 280:326 | -46 | 301 |
| 19 | FK UfaFK Ufa- | 8 | 246 | 62 | 82 | 102 | 214:288 | -74 | 268 |
| 20 | Arsenal TulaTula- | 7 | 212 | 60 | 46 | 106 | 210:313 | -103 | 226 |
| 21 | PFC SochiPFC SochiPremier Liga | 6 | 170 | 60 | 39 | 71 | 237:247 | -10 | 219 |
| 22 | Spartak NalchikNalchik- | 6 | 194 | 54 | 57 | 83 | 207:239 | -32 | 219 |
| 23 | FC Gazovik OrenburgOrenburgPremier Liga | 7 | 196 | 52 | 49 | 95 | 228:302 | -74 | 205 |
| 24 | FK KhimkiKhimki- | 7 | 213 | 48 | 59 | 106 | 218:361 | -143 | 203 |
| 25 | Schinnik JaroslawlSchinnik Jar- | 6 | 174 | 49 | 53 | 72 | 175:227 | -52 | 200 |
| 26 | Alania VladikavkazVladikavkaz- | 8 | 205 | 49 | 51 | 105 | 200:317 | -117 | 198 |
| 27 | Rotor WolgogradWolgograd- | 6 | 171 | 44 | 42 | 85 | 172:266 | -94 | 174 |
| 28 | FC Nizhny NovgorodFC Nizhny NovgPremier Liga | 6 | 140 | 36 | 29 | 75 | 129:225 | -96 | 137 |
| 29 | FK Fakel WoroneschFK Woronesch- | 5 | 120 | 21 | 47 | 52 | 97:166 | -69 | 110 |
| 30 | Wolga Nischni NowgorodWolga Nischn- | 4 | 134 | 28 | 25 | 81 | 103:218 | -115 | 109 |
| 31 | Sanfrecce HiroshimaHiroshima- | 2 | 69 | 31 | 13 | 25 | 78:76 | 2 | 106 |
| 32 | Luch-Energia VladivostokVladivostok- | 3 | 90 | 23 | 25 | 42 | 87:131 | -44 | 94 |
| 33 | Chernomorets NovorossiskNovorossisk- | 3 | 85 | 23 | 21 | 41 | 94:129 | -35 | 90 |
| 34 | Mordowia SaranskSaransk- | 3 | 90 | 20 | 22 | 48 | 82:150 | -68 | 82 |
| 35 | Baltika KaliningradBaltika KaliPremier Liga | 2 | 48 | 16 | 13 | 19 | 57:49 | 8 | 61 |
| 36 | Uralan ElistaElista- | 3 | 83 | 13 | 22 | 48 | 66:144 | -78 | 61 |
| 37 | AkronAkronPremier Liga | 2 | 48 | 15 | 11 | 22 | 61:81 | -20 | 56 |
| 38 | FC TambovFC Tambov- | 2 | 66 | 13 | 9 | 44 | 61:120 | -59 | 48 |
| 39 | FK TosnoFK Tosno- | 1 | 30 | 6 | 6 | 18 | 23:54 | -31 | 24 |
| 40 | FC Rotor WolgogradFC Rotor Wolgo- | 1 | 29 | 5 | 7 | 17 | 15:49 | -34 | 22 |
| 41 | Sibir NowosibirskNowosibirsk- | 1 | 30 | 4 | 8 | 18 | 34:58 | -24 | 20 |
| 42 | FK Yenisey KrasnoyarskKrasnoyarsk- | 1 | 30 | 4 | 8 | 18 | 24:55 | -31 | 20 |
| 43 | SKA-KhabarovskSKA-Khabarov- | 1 | 30 | 2 | 7 | 21 | 16:55 | -39 | 13 |
| 44 | Rostselmasch RostowR. Rostow- | 2 | 6 | 1 | 1 | 4 | 6:10 | -4 | 4 |
| 45 | PFK Sokol SaratowSokol Saratow- | 2 | 0 | 0 | 0 | 0 | -:- | -:- | - |
| 46 | Dynamo KievDynamo KievPremier Liga | 1 | 0 | 0 | 0 | 0 | -:- | -:- | - |